Robert A. Petit III
@rpetit3Bioinformatician at the Wyoming Public Health Laboratory. Developer of the Bactopia and other microbial genomic tools.
Language Breakdown
Lines of code distribution across 49 owned repositories
I-Shaped Developer
I-shapedSpecialist — deep expertise in HTML
Collaboration Network
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Repos
255
PRs
0
Growth
+18%
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Coding Streak
Contribution activity over the past year
Ragnar Groot Koerkamp
@RagnarGrootKoerkamp
rickbeeloo
@rickbeeloo
zhenxian
@zhengzhenxian
Daniel Park
@dpark01
Hajime Suzuki
@ocxtal
Top Repositories
Download FASTQ files from SRA or ENA repositories.
:dragon: :fly: Assemble bacterial isolate genomes from Nanopore reads
Add biological annotations to variants in a given VCF file.
Output FASTQ summary statistics in JSON format
A tool easily taken advantage of for in silico serogrouping of Pseudomonas aeruginosa isolates
Generate basic stats for an assembly.
A tool for typing SCCmec cassettes in assemblies
🐪Classification through yAML Heuristic Mapping Protocol 🐪
In silico Penicillin Binding Protein (PBP) typer for Streptococcus pneumoniae assemblies
software to identify primers that can distinguish genomes
Open Source Impact
Contributions to external projects
